talk · Tuesday 22 September · SAL B

Type specimens in Wikidata

Siobhan Leachman · Responsible AI, Open Digital Curation, and Round-Tripping for Biodiversity Data

Recording time 5:44:56–5:56:58Open on Vimeo ↗

The short versionA consistent Wikidata type specimen model lets anyone link type specimens to collectors, publications, taxa and identifiers as a transparent finding aid.

Overview

What this was about

Siobhan Leachman presented a proposed Wikidata data model for type specimens, developed with Auckland Museum, Te Papa, the Bioeconomy Science Institute and Wikidata editors to fix inconsistent modelling. Wikidata is intended as a non-canonical finding aid bridging sources and identifiers, with references and edit history supporting transparent reuse by AI applications. The model was built from existing items, likely queries and a crosswalk to Darwin Core; new properties (collector, specimen classifier, collection date, location collected) were proposed, and a trial batch of New Zealand Arthropod Collection holotypes was uploaded via OpenRefine from GBIF data. Documentation is on a WikiProject, Wikimedia Commons and a Zenodo community; future work includes GBIF occurrence ID, basis of record, preservation method and biocultural notice properties.

Why it matters. Improves findability and interoperability of type specimens and gives AI applications a well-referenced, provenance-rich source.

Key ideas

In the room

  • Motivation: inconsistent modelling of existing type specimen items; helping institutions translate Darwin Core data into Wikidata; supporting the digital extended specimen.
  • Wikidata tracks references per statement and all edits, supporting transparency and provenance for AI reuse.
  • Wikidata data are not canonical; they are a finding aid linking to the holding institution's data.
  • Approach: compare existing items, review standards including Darwin Core, design for likely queries, be pragmatic for institutions already publishing to GBIF.
  • New properties proposed for collector, specimen classifier, collection date and location collected.
  • Trial batch: holotypes of the New Zealand Arthropod Collection extracted from GBIF, cleaned and reconciled in OpenRefine, uploaded to Wikidata.
  • Documentation on a WikiProject, Wikimedia Commons and Zenodo (including the OpenRefine spreadsheet); exemplar items include a holotype first observed on iNaturalist and one linked to a DiSSCo DOI.
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Notable moments

In their words

Transcript

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